| Protein ZmGLK56 | |
|---|---|
|
ZmGLK56 is a protein in the G2-like family.
|
|
| Information | |
| TF Name: | ZmGLK56 |
| Species: | Maize |
| TF Family: | G2-like |
| Gene Name(Synonym): | GLK56 |
| Uniprot ID: | B8A1T5 |
| Subgenome: | 2 |
Protein ZmGLK56
ZmGLK56 is a protein in the G2-like family.
| Overview of domains present in v5 transcripts | ||
|---|---|---|
| G2-like | PF00249 | |
| Zm00001eb362240_T002 |  | |
| Zm00001eb362240_T001 | | |
Protein-DNA Interactions
Meme Logos for Maize v4 Gene IDs
| Gene ID | Type | MEME Logo | Sequence | FIMO | Position |
|---|---|---|---|---|---|
| Zm00001d011785 | DAPseq |  |
sequence | fimo | position |
| Zm00001d011785 | DAPseq |  |
sequence | fimo | position |
| Zm00001d011785 | ChIPseq |  |
sequence | fimo | position |
| Zm00001d011785 | PChIPseq |  |
sequence | fimo | position |
Interactions where ZmGLK56 is the regulator
Interactions where ZmGLK56 is the target
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Zm00001eb362240_T002 from maize genome v5
Amino Acid Sequence
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MGEEAVDDYELHMVCYGSDEDERVMEWESGLPGADELTPLSQPLVPPGLAAAFRIPPEPGRTLLDLHRASEATVARLRRA
PPSSPGTSSSPHGHQEARGGEGADSAAATTTNSNRRPRLVWTPQLHKRFVDVVAHLGIKKAVPKTIMELMNVEGLTRENV
ASHLQKYRLYVKRMRGQGPSPSDHIFAPTPVHGVAVGMVPMVSGQAYHYLYNGGGGGDR
MGEEAVDDYELHMVCYGSDEDERVMEWESGLPGADELTPLSQPLVPPGLAAAFRIPPEPGRTLLDLHRASEATVARLRRA
PPSSPGTSSSPHGHQEARGGEGADSAAATTTNSNRRPRLVWTPQLHKRFVDVVAHLGIKKAVPKTIMELMNVEGLTRENV
ASHLQKYRLYVKRMRGQGPSPSDHIFAPTPVHGVAVGMVPMVSGQAYHYLYNGGGGGDR
MGEEAVDDYELHMVCYGSDEDERVMEWESGLPGADELTPLSQPLVPPGLAAAFRIPPEPGRTLLDLHRASEATVARLRRA
PPSSPGTSSSPHGHQEARGGEGADSAAATTTNSNRRPRLVWTPQLHKRFVDVVAHLGIKKAVPKTIMELMNVEGLTRENV
ASHLQKYRLYVKRMRGQGPSPSDHIFAPTPVHGVAVGMVPMVSGQAYHYLYNGGGGGDR
MGEEAVDDYELHMVCYGSDEDERVMEWESGLPGADELTPLSQPLVPPGLAAAFRIPPEPGRTLLDLHRASEATVARLRRA
PPSSPGTSSSPHGHQEARGGEGADSAAATTTNSNRRPRLVWTPQLHKRFVDVVAHLGIKKAVPKTIMELMNVEGLTRENV
ASHLQKYRLYVKRMRGQGPSPSDHIFAPTPVHGVAVGMVPMVSGQAYHYLYNGGGGGDR
MGEEAVDDYELHMVCYGSDEDERVMEWESGLPGADELTPLSQPLVPPGLAAAFRIPPEPGRTLLDLHRASEATVARLRRA
PPSSPGTSSSPHGHQEARGGEGADSAAATTTNSNRRPRLVWTPQLHKRFVDVVAHLGIKKAVPKTIMELMNVEGLTRENV
ASHLQKYRLYVKRMRGQGPSPSDHIFAPTPVHGVAVGMVPMVSGQAYHYLYNGGGGGDR
MGEEAVDDYELHMVCYGSDEDERVMEWESGLPGADELTPLSQPLVPPGLAAAFRIPPEPGRTLLDLHRASEATVARLRRA
PPSSPGTSSSPHGHQEARGGEGADSAAATTTNSNRRPRLVWTPQLHKRFVDVVAHLGIKKAVPKTIMELMNVEGLTRENV
ASHLQKYRLYVKRMRGQGPSPSDHIFAPTPVHGVAVGMVPMVSGQAYHYLYNGGGGGDR
| Secondary Structure Color Code | |
|---|---|
| BEND | region with high backbone curvature without specific hydrogen bonding |
| HELX_LH_PP_P | left-handed polyproline helix |
| HELX_RH_3T_P | right-handed 3-10 helix |
| HELX_RH_AL_P | right-handed alpha helix |
| HELX_RH_PI_P | right-handed pi helix |
| STRN | beta strand |
| TURN_TY1_P | type I turn |
| UNDETERMINED | no data available |
| Domains Present | |
|---|---|
| PF00249 |
|
| G2-like |
|
| Hover here to show all domains | |
Nucleotide Sequence
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GAGGGAGGCGTTGATGGATTGCTCG...
GAGGGAGGCGTTGATGGATTGCTCGATTCCTGGTGGGAATTGATTGATTTCAGCTGCATGTGCTTGTGCTTGTGCTGCTCAATCGAATTCGAGTCCGAATTGGATTAGGCAGGTGGGTTGGGTAGGTGCGGGATCCAGCGAGCGGAGGATGGGCGAGGAGGCGGTGGACGACTACGAGCTCCACATGGTGTGCTACGGCAGCGACGAGGACGAGCGCGTGATGGAGTGGGAGTCGGGGCTCCCTGGCGCCGACGAGCTGACCCCGCTCTCGCAGCCGCTGGTGCCGCCGGGGCTGGCCGCGGCGTTCCGCATCCCGCCGGAGCCCGGGCGCACCCTGCTGGACCTGCACCGAGCGTCCGAAGCCACGGTGGCGCGGCTGCGGCGCGCGCCGCCGTCGTCGCCGGGCACCTCCTCCTCCCCCCACGGCCACCAGGAGGCGAGGGGGGGCGAAGGGGCGGACTCGGCGGCGGCGACTACCACGAACAGCAACAGACGGCCCCGGCTGGTTTGGACGCCGCAGCTGCACAAGCGGTTCGTGGACGTGGTGGCGCACCTGGGGATCAAGAAGGCGGTGCCCAAGACCATCATGGAGCTGATGAACGTGGAAGGTCTGACGCGGGAGAACGTGGCCAGCCACCTGCAGAAGTACCGGTTGTACGTGAAGCGGATGCGGGGGCAGGGTCCGTCCCCGTCCGACCACATCTTCGCACCCACACCGGTGCACGGCGTCGCCGTCGGCATGGTGCCCATGGTCAGCGGCCAGGCGTACCACTACCTGTACAACGGAGGAGGGGGAGGAGACAGATGACACCCGCTTCGGCGACGACTCCAGAATCTAGTTTCCTCTTGGGGAAGACCGGAAGACAAATCCAAAACGGAACAAGCGATTGCCTGCCTCACTCTATACTCTACTCCCTCCAAATTATCCAAAGCTTCTACTGTACTCCGTCCGTCCCGTTCCAAGGTATTCGGTATTTTTAAAGCCAAAGCTTTTGTTCAAGTTTATTAGAGAATAAATTTCGAAGCTTTTGGTGAAGGGGAAAGTAATGAGTTTTTAGTCCCATACAGAAAATTGAAGAGAAATAAAATTAACTT
GRMZM2G067702_T01 from maize genome v3
Amino Acid Sequence
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MGEEAVDDYELHMVCYGSDEDERVMEWESGLPGADELTPLSQPLVPPGLAAAFRIPPEPGRTLLDLHRASEATVARLRRA
PPSSPGTSSSPHGHQEARGGEGADSAAATTTNSNRRPRLVWTPQLHKRFVDVVAHLGIKKAVPKTIMELMNVEGLTRENV
ASHLQKYRLYVKRMRGQGPSPSDHIFAPTPVHGVAVGMVPMVSGQAYHYLYNGGGGGDR
Nucleotide Sequence
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ACCCACCAACACGCCACACAACACA...
ACCCACCAACACGCCACACAACACAAATATCTCCGTCCTTGTCCCCCATCTCTCTCGCCCGCCGCCGCCGGTTGAATCGACGGAGGGAGGCGTTGATGGATTGCTCGATTCCTGGTGGGAATTGATTGATTTCAGCTGCATGTGCTTGTGCTTGTGCTGCTCAATCGAATTCGAGTCCGAATTGGATTAGGCAGGTGGGTTGGGTAGGTGCGGGATCCAGCGAGCGGAGGATGGGCGAGGAGGCGGTGGACGACTACGAGCTCCACATGGTGTGCTACGGCAGCGACGAGGACGAGCGCGTGATGGAGTGGGAGTCGGGGCTCCCTGGCGCCGACGAGCTGACCCCGCTCTCGCAGCCGCTGGTGCCGCCGGGGCTGGCCGCGGCGTTCCGCATCCCGCCGGAGCCCGGGCGCACCCTGCTGGACCTGCACCGAGCGTCCGAAGCCACGGTGGCGCGGCTGCGGCGCGCGCCGCCGTCGTCGCCGGGCACCTCCTCCTCCCCCCACGGCCACCAGGAGGCGAGGGGGGGCGAAGGGGCGGACTCGGCGGCGGCGACTACCACGAACAGCAACAGACGGCCCCGGCTGGTTTGGACGCCGCAGCTGCACAAGCGGTTCGTGGACGTGGTGGCGCACCTGGGGATCAAGAAGGCGGTGCCCAAGACCATCATGGAGCTGATGAACGTGGAAGGTCTGACGCGGGAGAACGTGGCCAGCCACCTGCAGAAGTACCGGTTGTACGTGAAGCGGATGCGGGGGCAGGGTCCGTCCCCGTCCGACCACATCTTCGCACCCACACCGGTGCACGGCGTCGCCGTCGGCATGGTGCCCATGGTCAGCGGCCAGGCGTACCACTACCTGTACAACGGAGGAGGGGGAGGAGACAGATGACACCCGCTTCGGCGACGACTCCAGAATCTAGTTTCCTCTTGGGGAAGACCGGAAGACAAATCCAAAACGGAACAAGCGATTGCCTGCCTCACTCTATACTCTACTCCCTCCAAATTATCCAAAGCTTCTACTGTACTCCGTCCGTCCCGTTCCAAGGTATTCGGTATTTTTAAAGCCAAAGCTTTTGTTCAAGTTTATTAGAGAATAAATTTCGAAGCTTTTGGTGAAGGGGAAAGTAATGAGTTTTTAGTCCCATACAGAAAATTGAAGAGAAATAAAATTAACTTAAATAGCTTGTCTTTTGCCATTGCTTAACAGTTAAAAGCGCGTTTTACAGAACGTGTGATTGCTCGTGTGACTTGGGGTGTGGAGACAGACACTAATTCCGTTTCTATCTACTACATTTTGTCTTACATGACACGTTCGAAACTAAACCCATCGAAGCATGGATTTAGTTTCCTACATCTTTTGTGTGTGCTTGTCGTG
GRMZM2G067702_T02 from maize genome v3
Amino Acid Sequence
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MEWESGLPGADELTPLSQPLVPPGLAAAFRIPPEPGRTLLDLHRASEATVARLRRAPPSSPGTSSSPHGHQEARGGEGAD
SAAATTTNSNRRPRLVWTPQLHKRFVDVVAHLGIKKAVPKTIMELMNVEGLTRENVASHLQKYRLYVKRMRGQGPSPSDH
IFAPTPVHGVAVGMVPMVSGQAYHYLYNGGGGGDR
Nucleotide Sequence
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CGCCACACAACACAAATATCTCCGT...
CGCCACACAACACAAATATCTCCGTCCTTGTCCCCCATCTCTCTCGCCCGCCGCCGCCGGTTGAATCGACGGAGGGAGGCGTTGATGGATTGCTCGATTCCTGGTGGGAATTGATTGATTTCAGCTGCATGTGCTTGTGCTTGTGCTGCTCAATCGAATTCGAGTCCGAATTGGATTAGGCAGGTGGGTTGGGTAGGTGCGGGATCCAGCGAGCGGAGGATGGGCGCGTGATGGAGTGGGAGTCGGGGCTCCCTGGCGCCGACGAGCTGACCCCGCTCTCGCAGCCGCTGGTGCCGCCGGGGCTGGCCGCGGCGTTCCGCATCCCGCCGGAGCCCGGGCGCACCCTGCTGGACCTGCACCGAGCGTCCGAAGCCACGGTGGCGCGGCTGCGGCGCGCGCCGCCGTCGTCGCCGGGCACCTCCTCCTCCCCCCACGGCCACCAGGAGGCGAGGGGGGGCGAAGGGGCGGACTCGGCGGCGGCGACTACCACGAACAGCAACAGACGGCCCCGGCTGGTTTGGACGCCGCAGCTGCACAAGCGGTTCGTGGACGTGGTGGCGCACCTGGGGATCAAGAAGGCGGTGCCCAAGACCATCATGGAGCTGATGAACGTGGAAGGTCTGACGCGGGAGAACGTGGCCAGCCACCTGCAGAAGTACCGGTTGTACGTGAAGCGGATGCGGGGGCAGGGTCCGTCCCCGTCCGACCACATCTTCGCACCCACACCGGTGCACGGCGTCGCCGTCGGCATGGTGCCCATGGTCAGCGGCCAGGCGTACCACTACCTGTACAACGGAGGAGGGGGAGGAGACAGATGACACCCGCTTCGGCGACGACTCCAGAATCTAGTTTCCTCTTGGGGAAGACCGGAAGACAAATCCAAAACGGAACAAGCGATTGCCTGCCTCACTCTATACTCTACTCCCTCCAAATTATCCAAAGCTTCTACTGTACTCCGTCCGTCCCGTTCCAAGGTATTCGGTATTTTTAAAGCCAAAGCTTTTGTTCAAGTTTATTAGAGAATAAATTTCGAA
Zm00001d011785_T001 from maize genome v4
Amino Acid Sequence
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MGEEAVDDYELHMVCYGSDEDERVMEWESGLPGADELTPLSQPLVPPGLAAAFRIPPEPGRTLLDLHRASEATVARLRRA
PPSSPGTSSSPHGHQEARGGEGADSAAATTTNSNRRPRLVWTPQLHKRFVDVVAHLGIKKAVPKTIMELMNVEGLTRENV
ASHLQKYRLYVKRMRGQGPSPSDHIFAPTPVHGVAVGMVPMVSGQAYHYLYNGGGGGDR
Nucleotide Sequence
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ATGGGCGAGGAGGCGGTGGACGACT...
ATGGGCGAGGAGGCGGTGGACGACTACGAGCTCCACATGGTGTGCTACGGCAGCGACGAGGACGAGCGCGTGATGGAGTGGGAGTCGGGGCTCCCTGGCGCCGACGAGCTGACCCCGCTCTCGCAGCCGCTGGTGCCGCCGGGGCTGGCCGCGGCGTTCCGCATCCCGCCGGAGCCCGGGCGCACCCTGCTGGACCTGCACCGAGCGTCCGAAGCCACGGTGGCGCGGCTGCGGCGCGCGCCGCCGTCGTCGCCGGGCACCTCCTCCTCCCCCCACGGCCACCAGGAGGCGAGGGGGGGCGAAGGGGCGGACTCGGCGGCGGCGACTACCACGAACAGCAACAGACGGCCCCGGCTGGTTTGGACGCCGCAGCTGCACAAGCGGTTCGTGGACGTGGTGGCGCACCTGGGGATCAAGAAGGCGGTGCCCAAGACCATCATGGAGCTGATGAACGTGGAAGGTCTGACGCGGGAGAACGTGGCCAGCCACCTGCAGAAGTACCGGTTGTACGTGAAGCGGATGCGGGGGCAGGGTCCGTCCCCGTCCGACCACATCTTCGCACCCACACCGGTGCACGGCGTCGCCGTCGGCATGGTGCCCATGGTCAGCGGCCAGGCGTACCACTACCTGTACAACGGAGGAGGGGGAGGAGACAGATGA
Zm00001eb362240_T001 from maize genome v5
Amino Acid Sequence
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MGEEAVDDYELHMVCYGSDEDERVMEWESGLPGADELTPLSQPLVPPGLAAAFRIPPEPGRTLLDLHRASEATVARLRRA
PPSSPGTSSSPHGHQEARGGEGADSAAATTTNSNRRPRLVWTPQLHKRFVDVVAHLGIKKAVPKTIMELMNVEGLTRENV
ASHLQKYRLYVKRMRGQGPSPSDHIFAPTPVHGVAVGMVPMVSGQAYHYLYNGGGGGDR
Nucleotide Sequence
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CCCAAATACTTACACGCAGCTCCTC...
CCCAAATACTTACACGCAGCTCCTCTGCTCTGCCTCCCAATACCCACCAACACGCCACACAACACAAATATCTCCGTCCTTGTCCCCCATCTCTCTCGCCCGCCGCCGCCGGTTGAATCGACGGAGGGAGGCGTTGATGGATTGCTCGATTCCTGGCAGGTGGGTTGGGTAGGTGCGGGATCCAGCGAGCGGAGGATGGGCGAGGAGGCGGTGGACGACTACGAGCTCCACATGGTGTGCTACGGCAGCGACGAGGACGAGCGCGTGATGGAGTGGGAGTCGGGGCTCCCTGGCGCCGACGAGCTGACCCCGCTCTCGCAGCCGCTGGTGCCGCCGGGGCTGGCCGCGGCGTTCCGCATCCCGCCGGAGCCCGGGCGCACCCTGCTGGACCTGCACCGAGCGTCCGAAGCCACGGTGGCGCGGCTGCGGCGCGCGCCGCCGTCGTCGCCGGGCACCTCCTCCTCCCCCCACGGCCACCAGGAGGCGAGGGGGGGCGAAGGGGCGGACTCGGCGGCGGCGACTACCACGAACAGCAACAGACGGCCCCGGCTGGTTTGGACGCCGCAGCTGCACAAGCGGTTCGTGGACGTGGTGGCGCACCTGGGGATCAAGAAGGCGGTGCCCAAGACCATCATGGAGCTGATGAACGTGGAAGGTCTGACGCGGGAGAACGTGGCCAGCCACCTGCAGAAGTACCGGTTGTACGTGAAGCGGATGCGGGGGCAGGGTCCGTCCCCGTCCGACCACATCTTCGCACCCACACCGGTGCACGGCGTCGCCGTCGGCATGGTGCCCATGGTCAGCGGCCAGGCGTACCACTACCTGTACAACGGAGGAGGGGGAGGAGACAGATGACACCCGCTTCGGCGACGACTCCAGAATCTAGTTTCCTCTTGGGGAAGACCGGAAGACAAATCCAAAACGGAACAAGCGATTGCCTGCCTCACTCTATACTCTACTCCCTCCAAATTATCCAAAGCTTCTACTGTACTCCGTCCGTCCCGTTCCAAGGTATTCGGTATTTTTAAAGCCAAAGCTTTTGTTCAAGTTTATTAGAGAATAAATTTCGAAGCTTTTGGTGAAGGGGAAAGTAATGAGTTTTTAGTCCCATACAGAAAATTGAAGAGAAATAAAATTAACTT
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